lity not only within a single cell but, also between neighboring cells and to the basement membrane. Due to the dominant nature of K5 and K14 mutations in EBS-DM, misfolded proteins can be integrated into the IFs, rendering them sensitive to mechanical stress. Upon trauma, these filaments disrupt and the keratinocytes lyse, leading to intra-epidermal blistering. Yet, the function of IFs is considered to be more than just to provide mechanical stability to basal keratinocytes. It was shown that, upon mechanical stress, major MAPK pathways like ERK are activated in K14 mutant cell lines and change the apoptotic machinery within these cells. Another form of stress response was shown in K14 mutant cell lines and in a K52/2 mouse model 12603839 for EBS. In the latter, the inflammatory cytokines IL-6 and IL-1b were found to be upregulated in K52/2 mouse skin and it was hypothesized that keratin mutations contribute to EBS by inducing an inflammatory phenotype that mediates a stress response. An important role of IL-1b in the skin is to activate keratinocytes in many pathological conditions and upon wounding. In basal keratinocytes, IL-1b is present in the cytoplasm in a precursor form. After injury, IL-1b is processed and released and activates signal transduction pathways in surrounding cells in both autocrine and paracrine fashion. In keratinocytes, IL-1b alters gene expression and causes cells to become proliferative and migratory. Based on the fact that many stress pathways are activated in K14 mutant cells, we hypothesized that these pathways contribute to the blistering phenotype of EBS-DM patients to a greater extent than is usually supposed. In the present study, we investigated the gene expression profiles of two EBS-DM cell lines and compared them to that of a wild-type cell line. The skin biopsy for EBDM-1 cells was performed at the Dermatology Department of Paracelsus Medical University Salzburg. The primary keratinocytes were isolated by incubating the biopsy in trypsin-EDTA for 30 minutes and transferring the epidermis onto a feeder layer in EpilifeH medium. Immortalized keratinocyte cell lines were cultured in RM medium. All cell lines were incubated at 37uC, 5% CO2 in a humidified atmosphere. All experiments were performed within comparable passages and at 70% confluence. For interleukin-1b experiments, human IL-1b/IL-IF2 antibody polyclonal goat IgG was added to the culture medium at a final concentration of 2 mg/ml of medium. Microarray SAR 405 web Analysis According to MIAME guidelines, the 16895977 microarray was performed as follows: NEB-1 and KEB-7 cells of passage 20 and EBDM-1 cells of passage 13 were harvested at 70% confluence and total RNA was extracted from cell lysates using an RNeasy Mini Kit according to the manufacturer’s protocol. Sample processing and data analysis was performed by an Affymetrix Service Provider and Core Facility, “KFB-Center of Excellence for Fluorescent Bioanalytics”in Regensburg, JosefEngert-Strae 9, D-93053 Germany. At KFB, an AmbionH WT Expression Kit was used to generate sense-strand cDNA from total RNA of NEB-1, KEB-7 and EBDM-1 samples according to the manufacturer’s protocol. The sense-strand cDNA was then fragmented, labelled and hybridized using the Affymetrix GeneChipH WT Terminal Labeling and Hybridization Kit according to the manufacturers protocol. For data analysis, the Affymetrix Expression Console Software was used, and the Robust Multi-chip Analysis algorithm was applied with default settings. The micr
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